The detailed information of tRNA gene sequence


Sequence ID>WENV170670976
Genome IDLAHU01006785
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 99
End posion on genome 24
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttgcaagttt
tRNA gene sequence 
GGGGCCGTAGCTCAATTGGGAGAGCGCTACCATGGCATGGTAGAGGCCGTGGGTTCAAAT
CCCATCGGCTCCACCA
Downstream region at tRNA end position 
aaaaggactg
Secondary structure (Cloverleaf model)
>WENV170670976	Ala	GGC
                   t      ACCA aaaaggactg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T A C C C     A
      T A A        A      + | | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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