The detailed information of tRNA gene sequence


Sequence ID>WENV170670992
Genome IDLAHU01007472
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1189
End posion on genome 1118
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttactactat
tRNA gene sequence 
GCCAAGGTAGCTTAGAGGCGAAGCGGTGGACTGCAGATCCATTACACGTGAGTTCAAATC
TCACCCTTGGCTttt
Downstream region at tRNA end position 
taaaatagat
Secondary structure (Cloverleaf model)
>WENV170670992	Cys	GCA
                   t      Tttt taaaatagat
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C A C T C     A
        G A        A      | | | | |     A
      A     T T C G       G T G A G     C
      G     | | | |                 T T
      G     A A G C
        C G        G     TACAC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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