The detailed information of tRNA gene sequence


Sequence ID>WENV170670997
Genome IDLAHU01007802
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 500
End posion on genome 575
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgcgcgataa
tRNA gene sequence 
CGCGGGGTAGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTAGGTTCAAGT
CCTATCCCCGCAACCA
Downstream region at tRNA end position 
tattgtgcaa
Secondary structure (Cloverleaf model)
>WENV170670997	Met	CAT
                   a      ACCA tattgtgcaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T A T C C     A
      T G A        A      + | | | |     A
    T       C G A G       G T A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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