The detailed information of tRNA gene sequence


Sequence ID>WENV170671024
Genome IDLAHU01008581
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 845
End posion on genome 771
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gggcgtttcT
tRNA gene sequence 
GGGCTCGTAGCTCAGCTGGAAGAGCGCCGCCTTTGCGAGGCGGAGGCCCTGGGTTCGAAT
CCCAGCGAGTCCATgt
Downstream region at tRNA end position 
actagatgca
Secondary structure (Cloverleaf model)
>WENV170671024	Ala	TGC
                   T      ATgt actagatgca
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G A C C C     A
      C G A        A      | | | | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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