The detailed information of tRNA gene sequence


Sequence ID>WENV170671061
Genome IDLAHU01010551
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 3935
End posion on genome 3861
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcggcgttct
tRNA gene sequence 
GGGCCCATAGCTTAGCCAGGTAGAGCGCCCGGCTCATAACCGGGCGGCCATGGGTTCGAA
CCCCATTGGGCCCACtt
Downstream region at tRNA end position 
aaactcttcc
Secondary structure (Cloverleaf model)
>WENV170671061	Met	CAT
                   t      ACtt aaactcttcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C A
                    T     T A C C C     A
      C G A        A      | | | | |     G
    C       T T C G       A T G G G     C
    A       + | | |                 T T
    G       G A G C
      G T A        G     CGGCC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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