The detailed information of tRNA gene sequence


Sequence ID>WENV170671073
Genome IDLAHU01010647
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 3039
End posion on genome 3114
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttgagcatgc
tRNA gene sequence 
GGGCGGGTAGCTCAGCTGGAAGAGCGCCACGCTTACACCGTGGATGTCACAGGTTCGAGC
CCTGTCCCGCCTACCA
Downstream region at tRNA end position 
gaaaaagaca
Secondary structure (Cloverleaf model)
>WENV170671073	Val	TAC
                   c      ACCA gaaaaagaca
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          C G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     ATGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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