The detailed information of tRNA gene sequence


Sequence ID>WENV170671074
Genome IDLAHU01010757
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 333
End posion on genome 407
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aggtgcttgc
tRNA gene sequence 
GGGCCCGTGGTCTAGCTGGTTATGACGTCGCCTTGACATGGCGGAGGTCATGCGTTCGAA
TCGCGTCGGGCCCACtt
Downstream region at tRNA end position 
gagcccaagt
Secondary structure (Cloverleaf model)
>WENV170671074	Val	GAC
                   c      ACtt gagcccaagt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C G C     A
      C G A        G      | + | | |     G
    T       T C T G       A T G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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