The detailed information of tRNA gene sequence


Sequence ID>WENV170671076
Genome IDLAHU01011117
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 2440
End posion on genome 2365
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ataccaaaac
tRNA gene sequence 
GTCCCCATCGTCTAGAGGCCTAGGACACGGGCCTTTCACGCCTGTAACCGCGGTTCGACT
CCGCGTGGGGACGCCA
Downstream region at tRNA end position 
aatataaaaa
Secondary structure (Cloverleaf model)
>WENV170671076	Glu	TTC
                   c      GCCA aatataaaaa
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T C
                    T     G C G C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G C G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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