The detailed information of tRNA gene sequence


Sequence ID>WENV170671103
Genome IDLAHU01013869
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 898
End posion on genome 827
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
agaagtatca
tRNA gene sequence 
GGGCTCGTAGATCAGGGGTAGATCGTCACGTTTGCAACGTGAAGGCCACGGGTTCGAATC
CCGTCGAGTCCAtct
Downstream region at tRNA end position 
ttttccagtg
Secondary structure (Cloverleaf model)
>WENV170671103	Ala	TGC
                   a      Atct ttttccagtg
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T G C C C     A
        G A        A      | | | | |     G
      G     C T A G       A C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    T - A
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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