The detailed information of tRNA gene sequence


Sequence ID>WENV170671108
Genome IDLAHU01014391
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 3144
End posion on genome 3226
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
attcccgacc
tRNA gene sequence 
GCGAGTGTGACTGAGAGGCCAAAAGTGACCGACTCAAGATCGGTTCTCGCAGGAGTTCGC
AGGTTCGAATCCTGCCACTCGCAtcc
Downstream region at tRNA end position 
ggttttccgg
Secondary structure (Cloverleaf model)
>WENV170671108	Leu	CAA
                   c      Atcc ggttttccgg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      A G A        G      | | | | |     G
    G       G T C A       G C A G G     C
    G         | | |                 T T
    C       A A G T
      C A A        G     TCTCGCAGGAGTTC
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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