The detailed information of tRNA gene sequence


Sequence ID>WENV170671129
Genome IDLAHU01016759
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 88
End posion on genome 3
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
atttttctag
tRNA gene sequence 
GCGGGGGTTGCCGAGCATGGTCTAAGGCGCCGGACTTAAGATCCGGTGACGCAGGTCTTC
GAGGGTTCGAATCCCTTCCCCCGCACtt
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170671129	Leu	TAA
                   g      ACtt nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
    A C G A        T      + | | | |     G
  T         G C C G       G A G G G     C
  G           | | |                 T T
  G         A G G C
    T C T A        G     TGACGCAGGTCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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