The detailed information of tRNA gene sequence


Sequence ID>WENV170671147
Genome IDLAHU01019053
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 444
End posion on genome 517
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taagtgttaA
tRNA gene sequence 
GCCAAGGTAGCTTAGAGGCGAAGCGGTGGACTGCAGATCCATTACACGGGAGTTCAAATC
TCTCCCTTGGCTTta
Downstream region at tRNA end position 
aaccatttaa
Secondary structure (Cloverleaf model)
>WENV170671147	Cys	GCA
                   A      TTta aaccatttaa
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
        G A        A      | + | | |     A
      A     T T C G       G G G A G     C
      G     | | | |                 T T
      G     A A G C
        C G        G     TACAC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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