The detailed information of tRNA gene sequence


Sequence ID>WENV170671178
Genome IDLAHU01023086
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 2785
End posion on genome 2709
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
acctgcttgc
tRNA gene sequence 
GGGCCCGTGGTCTAGCTGGTTATGACGTCGCCTTGACATGGCGGAGGTCATGCGTTCGAA
TCGCGTCGGGCCCACCT
Downstream region at tRNA end position 
atcagcccaa
Secondary structure (Cloverleaf model)
>WENV170671178	Val	GAC
                   c      ACCT atcagcccaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C G C     A
      C G A        G      | + | | |     G
    T       T C T G       A T G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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