The detailed information of tRNA gene sequence


Sequence ID>WENV170671183
Genome IDLAHU01023332
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 2958
End posion on genome 2882
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tccgtcgcgt
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACATCGCCTTGACATGGCGGGGATCATGCGTTCGAA
TCGCATCGAGCCCACCA
Downstream region at tRNA end position 
gaaactgccc
Secondary structure (Cloverleaf model)
>WENV170671183	Val	GAC
                   t      ACCA gaaactgccc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T A C G C     A
      C G A        G      | | | | |     G
    T       T C T G       A T G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        A     GGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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