The detailed information of tRNA gene sequence


Sequence ID>WENV170671187
Genome IDLAHU01023486
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 2164
End posion on genome 2237
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tgtattcctc
tRNA gene sequence 
GCCTCAGTAGCTCAGTTCGGGAGAGCGCCAGACTGAAGATCTGGTTGTCCCCGGTTCAAA
TCCGGGCTGAGGCAtac
Downstream region at tRNA end position 
ttctcaaaag
Secondary structure (Cloverleaf model)
>WENV170671187	Phe	GAA
                   c      Atac ttctcaaaag
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          T A
                    T     G G G C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C C G G     C
    C       | | | |                 T T
    G       G A G C
      G G A        G     TTGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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