The detailed information of tRNA gene sequence


Sequence ID>WENV170671209
Genome IDLAHU01025863
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 276
End posion on genome 204
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
taactatttt
tRNA gene sequence 
GCTGGTGTAGCTCAATCGGCAGAGCAGCTGATTTGTAATCAGCAGGTTGCGGGTTCGAGT
CCCATCACCAGCTata
Downstream region at tRNA end position 
acggagaggt
Secondary structure (Cloverleaf model)
>WENV170671209	Thr	TGT
                   t      Tata acggagaggt
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T A C C C     A
      T A A        A      +   | | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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