The detailed information of tRNA gene sequence


Sequence ID>WENV170671216
Genome IDLAHU01026767
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 395
End posion on genome 469
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tactaggagc
tRNA gene sequence 
GGGCCGATAGATCAGAGGAAGATCGCTTCCTTGGCATGGAAGAGGCCGCGGGTTCAATTC
CCGCTCGGTCCATCA
Downstream region at tRNA end position 
ctttttattc
Secondary structure (Cloverleaf model)
>WENV170671216	Ala	GGC
                   c      ATCA ctttttattc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T          T T
                    T     C G C C C     A
        G A        A      | | | | |     A
      A     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        A A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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