The detailed information of tRNA gene sequence


Sequence ID>WENV170671223
Genome IDLAHU01027319
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 628
End posion on genome 702
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcgttacgT
tRNA gene sequence 
GGCGGTATAGCTCAGTCGGTAGAGCAAACGGCTCATATCCGTTAGGTCATAGGTTCAAGC
CCTATTGCCGCTAAat
Downstream region at tRNA end position 
ctttcaaagg
Secondary structure (Cloverleaf model)
>WENV170671223	Met	CAT
                   T      AAat ctttcaaagg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     A - T          C G
                    T     T A T C C     A
      T G A        A      | | | | |     A
    C       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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