The detailed information of tRNA gene sequence


Sequence ID>WENV170671266
Genome IDLAHU01031397
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 2030
End posion on genome 2115
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acttacttgt
tRNA gene sequence 
GGAGGATTAGTCCTAATTGGTAAGGCAGCGGTCTTGAAAACCGCCGGGTTCTGCCCATGG
GGGTTCGAATCCCTCATCCTCCGCCA
Downstream region at tRNA end position 
taacatagtg
Secondary structure (Cloverleaf model)
>WENV170671266	Ser	TGA
                   t      GCCA taacatagtg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C C T G       G G G G G     C
    T         | + |                 T T
    G       A G G C
      G T A        A     CGGGTTCTGCCCAT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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