The detailed information of tRNA gene sequence


Sequence ID>WENV170671304
Genome IDLAHU01036572
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 387
End posion on genome 465
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttaatgccta
tRNA gene sequence 
CGGGATGTAGCTCAGCATGGTGTAGAGCGCTTGCTTCGGGAGCAAGAGGCCGCTGGTTCA
AATCCAGTCATCCCGACCA
Downstream region at tRNA end position 
tttcaccgct
Secondary structure (Cloverleaf model)
>WENV170671304	Pro	CGG
                   a      ACCA tttcaccgct
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G A C C     A
    A C G A        A      + | | | |     A
  T         C T C G       G C T G G     C
  G         | | | |                 T T
  G         G A G C
    T G T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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