The detailed information of tRNA gene sequence


Sequence ID>WENV170671313
Genome IDLAHU01037805
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 534
End posion on genome 459
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ttaaccaatc
tRNA gene sequence 
GGGTCGGTAGCTCAGTCGGTAGAGCATCGGACTGAAAATCCGAGTGTCGGCAGTTCAATT
CTGCCCTGACCCACCA
Downstream region at tRNA end position 
ttaaaatcaa
Secondary structure (Cloverleaf model)
>WENV170671313	Phe	GAA
                   c      ACCA ttaaaatcaa
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G + T
                     G - C          T T
                    T     C C G T C     A
      T G A        A      | | | | |     A
    C       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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