The detailed information of tRNA gene sequence


Sequence ID>WENV170671337
Genome IDLAHU01040351
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1212
End posion on genome 1137
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttcgcctcac
tRNA gene sequence 
AGGCCAGTAGCTCCAATGGTAGAGCGGCGGTCTCCAAAACCGTTTGTTGAGGGTTCGAAT
CCTTCCTGGCCTGCCA
Downstream region at tRNA end position 
gcataacctc
Secondary structure (Cloverleaf model)
>WENV170671337	Trp	CCA
                   c      GCCA gcataacctc
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T T C C     A
      A A C        A      | | + | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     TTGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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