The detailed information of tRNA gene sequence


Sequence ID>WENV170671390
Genome IDLAHU01045557
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1293
End posion on genome 1369
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ggaaatgtac
tRNA gene sequence 
TCCCCGGTAGCTCAATCGGCAGTAGCGGCTGGCTGTTAACCAGTAGGTTGCAAGTTCGAG
TCTTGCCCGGGGAGCCA
Downstream region at tRNA end position 
gataatcaaa
Secondary structure (Cloverleaf model)
>WENV170671390	Asn	GTT
                   c      GCCA gataatcaaa
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C G T T C     A
      T A A        A      | | | | |     G
    C       C T C G       G C A A G     C
    G         | | |                 T T
    G       T A G C
      C A G        G     AGGTT
                    G + T
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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