The detailed information of tRNA gene sequence


Sequence ID>WENV170671402
Genome IDLAHU01046962
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1868
End posion on genome 1943
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tatatcataC
tRNA gene sequence 
GGGCCCGTAGCCTAGTTGGATAGGGCGTCGGACTTCTAATCCGAAGGTCCCGGGTTCAAA
TCCCGGCGGGTCCGTtt
Downstream region at tRNA end position 
ttagaatcac
Secondary structure (Cloverleaf model)
>WENV170671402	Arg	TCT
                   C      GTtt ttagaatcac
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      T G A        A      | | | | |     A
    T       T C C G       C C G G G     C
    G       + | | |                 T T
    G       G G G C
      A T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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