The detailed information of tRNA gene sequence


Sequence ID>WENV170671448
Genome IDLAHU01056375
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 575
End posion on genome 491
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnatcatta
tRNA gene sequence 
GCCGGGATAGCCTAGCCAGGTAAGGCGCGGGACTTGAGATCCCGTGGAGCATGGCTCCGC
CAGGGTTCAAATCCCTGTCCCGGCGtac
Downstream region at tRNA end position 
attaacctta
Secondary structure (Cloverleaf model)
>WENV170671448	Ser	TGA
                   a      Gtac attaacctta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        A      | | | | |     A
    C       T C C G       C A G G G     C
    A       | | | |                 T T
    G       A G G C
      G T A        G     TGGAGCATGGCTCCGC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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