The detailed information of tRNA gene sequence


Sequence ID>WENV170671452
Genome IDLAHU01058367
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 112
End posion on genome 40
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tttattatac
tRNA gene sequence 
GGGAGCTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCACAGGTTCGAGC
CCTGTTGTTCCCAtta
Downstream region at tRNA end position 
atatacggca
Secondary structure (Cloverleaf model)
>WENV170671452	Val	TAC
                   c      Atta atatacggca
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     T   T          C G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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