The detailed information of tRNA gene sequence


Sequence ID>WENV170671466
Genome IDLAHU01062193
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1552
End posion on genome 1476
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgcttatctc
tRNA gene sequence 
AGTCCCGTAGCTCAGTTGGTTAGAGCGCTACACTGATAATGTAGAGGTCCCCAGTTCAAC
TCTGGGTGGGACTACCA
Downstream region at tRNA end position 
aaaaagcaac
Secondary structure (Cloverleaf model)
>WENV170671466	Ile	GAT
                   c      ACCA aaaaagcaac
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G + T          T C
                    T     G G G T C     A
      T G A        A      | | | | |     A
    T       C T C G       C C C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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