The detailed information of tRNA gene sequence


Sequence ID>WENV170671480
Genome IDLAHU01064303
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 538
End posion on genome 464
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gcggtgcagc
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGCTATGACGTCGCCTTGACATGGCGGAGGTCCGGAGTTCGAA
TCTCCGCGGGCCCACtc
Downstream region at tRNA end position 
cttctttcac
Secondary structure (Cloverleaf model)
>WENV170671480	Val	GAC
                   c      ACtc cttctttcac
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G C C T C     A
      C G A        G      | | | | |     G
    T       T C T G       C G G A G     C
    G         | | |                 T T
    G       T G A C
      C T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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