The detailed information of tRNA gene sequence


Sequence ID>WENV170671505
Genome IDLAHU01068230
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 349
End posion on genome 424
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
cttttgtgcT
tRNA gene sequence 
GCCCTCGTAGTTTAGCTGGATAAAATATTGGCCTGCGGAGCCGAAGCCCTGGGTTCGAAT
CCCGGCGAGGGCGTCt
Downstream region at tRNA end position 
ttattactaa
Secondary structure (Cloverleaf model)
>WENV170671505	Arg	GCG
                   T      GTCt ttattactaa
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | + | | |     G
    T       T T T G       C T G G G     C
    G       | | | +                 T T
    G       A A A T
      A T A        A     AGCC
                    T - A
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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