The detailed information of tRNA gene sequence


Sequence ID>WENV170671514
Genome IDLAHU01070150
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1505
End posion on genome 1418
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccattttaat
tRNA gene sequence 
GCCGAGGTAGTCTAGCTAGGTAAGGCGGCGGTCTCGAAAACCGCTGGTGCTCGCCACCAC
AAGGGTTCAAATCCCTTCCTCGGCGCCA
Downstream region at tRNA end position 
tctatcatat
Secondary structure (Cloverleaf model)
>WENV170671514	Ser	CGA
                   t      GCCA tctatcatat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        A      | | | | |     A
    T       T C T G       A A G G G     C
    A       | | + |                 T T
    G       A G G C
      G T A        G     TGGTGCTCGCCACCAC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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