The detailed information of tRNA gene sequence


Sequence ID>WENV170671516
Genome IDLAHU01070590
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 354
End posion on genome 429
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cagcgtcttc
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCCGGGGTTCGACT
CCCCGTAGCTCCACCA
Downstream region at tRNA end position 
aagaaaaatc
Secondary structure (Cloverleaf model)
>WENV170671516	Ala	GGC
                   c      ACCA aagaaaaatc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G + T          T C
                    T     G C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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