The detailed information of tRNA gene sequence


Sequence ID>WENV170671521
Genome IDLAHU01072287
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 341
End posion on genome 416
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agatagacac
tRNA gene sequence 
GGTGACGTAGCCAAGATGGTTAAGGCCGCGGTCTGCAAAACCGCTATCATGGGTTCGAGT
CCCATCGTCACCTCCA
Downstream region at tRNA end position 
ttattgaata
Secondary structure (Cloverleaf model)
>WENV170671521	Cys	GCA
                   c      TCCA ttattgaata
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     T A C C C     A
      A G A        A      | | | | |     G
    T       A C C G       A T G G G     C
    G         | | |                 T T
    G       A G G C
      T T A        C     TATC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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