The detailed information of tRNA gene sequence


Sequence ID>WENV170671553
Genome IDLAHU01084399
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 484
End posion on genome 408
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ttttctgatg
tRNA gene sequence 
GCCGGGGTGGGGTAGCATGGTTATCCTATGGGACTGTGGATCCCATGACTCGGGTTCAAA
TCTCGGCCCCGGCCCCT
Downstream region at tRNA end position 
acttatttct
Secondary structure (Cloverleaf model)
>WENV170671553	His	GTG
                   g      CCCT acttatttct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C T C     A
    A C G A        G      + | | + |     A
  T         T G G G       T C G G G     C
  G           | | +                 T T
  G         T C C T
    T T A          A     TGAC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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