The detailed information of tRNA gene sequence


Sequence ID>WENV170671562
Genome IDLAHU01087161
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1886
End posion on genome 1961
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gatattgagt
tRNA gene sequence 
GGGCCACTAGCTCAGTTGGTAGAGCACCGGACTTTTAATCCGGGTGTCGAAGGTTCGAAT
CCTTCATGGCTCACCA
Downstream region at tRNA end position 
ttttttttat
Secondary structure (Cloverleaf model)
>WENV170671562	Lys	TTT
                   t      ACCA ttttttttat
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T
                     C   A          T A
                    T     C T T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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