The detailed information of tRNA gene sequence


Sequence ID>WENV170671582
Genome IDLAHU01095154
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 211
End posion on genome 136
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gaaaggtcgc
tRNA gene sequence 
GGGCCTGTAGCTCAGAGGATAGAGCGACAGCCTCCTAAGCTGTAGGTCGGCCGTTCGAAT
CGGCCCAGGCTCGCCA
Downstream region at tRNA end position 
ttttaaaccg
Secondary structure (Cloverleaf model)
>WENV170671582	Arg	CCT
                   c      GCCA ttttaaaccg
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C C G G C     A
      A G A        A      | | | | |     G
    G       C T C G       G G C C G     C
    G       | | | |                 T T
    A       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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