The detailed information of tRNA gene sequence


Sequence ID>WENV170671591
Genome IDLAHU01095833
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1744
End posion on genome 1818
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ggcaatttat
tRNA gene sequence 
GGGCCCGTAGCATAGCCCGGTGGTGCGCCCGGCTGATAACCGGGAGGTCATGTGTTCGAA
TCACATCGGGCCCACtc
Downstream region at tRNA end position 
ccattttctt
Secondary structure (Cloverleaf model)
>WENV170671591	Ile	GAT
                   t      ACtc ccattttctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C A C     A
      C G A        A      | | | | |     G
    C       T A C G       A T G T G     C
    C       + | | |                 T T
    G       G T G C
      G T G        G     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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