The detailed information of tRNA gene sequence


Sequence ID>WENV170671616
Genome IDLAHU01106931
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 127
End posion on genome 203
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atagatttca
tRNA gene sequence 
GGGGTCGTAGTTCAGTTGGTTAGAACGCCTGCCTGTCACGCAGGAGGTCGCGAGTTCGAG
TCTCGTCGGCCCCGCAA
Downstream region at tRNA end position 
aagctcatca
Secondary structure (Cloverleaf model)
>WENV170671616	Asp	GTC
                   a      GCAA aagctcatca
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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