The detailed information of tRNA gene sequence


Sequence ID>WENV170671619
Genome IDLAHU01107395
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1108
End posion on genome 1197
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tatcattacc
tRNA gene sequence 
GGAGGGATGGCTGAGCGGCCGAAAGCGGCGGTCTTGAAAACCGTTGGGCATGCAAGTGCC
CCGTGGGTTCGAATCCTACTCCCTCCGCCA
Downstream region at tRNA end position 
ttattccact
Secondary structure (Cloverleaf model)
>WENV170671619	Ser	TGA
                   c      GCCA ttattccact
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A T C C     A
      C G A        G      | | + | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        G     TGGGCATGCAAGTGCCCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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