The detailed information of tRNA gene sequence


Sequence ID>WENV170671631
Genome IDLAHU01111981
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 31
End posion on genome 116
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtatatccgg
tRNA gene sequence 
GCCGGGGTAGTCTAGTCCGGAAAGGCGGTGGCCTTGAAAGCCACTGGTGCCCAGCACCTC
AAGAGTTCAAATCTCTTCCCCGGCGCtc
Downstream region at tRNA end position 
atctcatttc
Secondary structure (Cloverleaf model)
>WENV170671631	Ser	TGA
                   g      GCtc atctcatttc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C T C     A
      T G A        A      | | | | |     A
    C       T C T G       A A G A G     C
    C       | | + |                 T T
    G       A G G C
      G A A        G     TGGTGCCCAGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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