The detailed information of tRNA gene sequence


Sequence ID>WENV170671698
Genome IDLAHU01133611
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 685
End posion on genome 760
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ggcccaaagt
tRNA gene sequence 
GTCCCTATCGTCTAGCTTGGCCTAGGACATCGGCCTTTCACGCCGACAACGGGGGTTCGA
ATCCCCCTGGGGACGCtc
Downstream region at tRNA end position 
tttttgtttc
Secondary structure (Cloverleaf model)
>WENV170671698	Glu	TTC
                   t      GCtc tttttgtttc
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     C C C C C     A
    T C G A        C      | | | | |     G
  T         T C T G       G G G G G     C
  G         + | | |                 T T
  G         G G A C
    C C T A        A     CAAC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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