The detailed information of tRNA gene sequence


Sequence ID>WENV170671709
Genome IDLAHU01136779
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 2162
End posion on genome 2089
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
taaggcaaca
tRNA gene sequence 
GGACCCGTAGCCCAGTGGATAAGGCGACGGCCTTCTAAGCCGTAGATCGAGGGTTCGAAT
CCCTCCGGGTCCGCtt
Downstream region at tRNA end position 
atgtttttca
Secondary structure (Cloverleaf model)
>WENV170671709	Arg	TCT
                   a      GCtt atgtttttca
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       C C C G       G A G G G     C
    G         | | |                 T T
    A       A G G C
      T A          G     AGATC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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