The detailed information of tRNA gene sequence


Sequence ID>WENV170671726
Genome IDLAHU01139742
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 198
End posion on genome 283
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgtgcggccg
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTATGGCGCACGCTTGGAAAGCGTGTTGGGTGAAAGCCCTC
GGGGGTTCGAATCCCCCATCCTCCGCtc
Downstream region at tRNA end position 
tcggaagcac
Secondary structure (Cloverleaf model)
>WENV170671726	Ser	GGA
                   g      GCtc tcggaagcac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C C C C C     A
      T G A        C      | | | | |     G
    G       T C C G       G G G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGGTGAAAGCCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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