The detailed information of tRNA gene sequence


Sequence ID>WENV170671734
Genome IDLAHU01142333
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 424
End posion on genome 500
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaacggtgat
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGATAGAGCACCGGACTCCAAATCCGGGGGATGGGGGTTCAAG
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tctatttnnn
Secondary structure (Cloverleaf model)
>WENV170671734	Trp	CCA
                   t      GCCA tctatttnnn
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     A
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGAT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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