The detailed information of tRNA gene sequence


Sequence ID>WENV170671739
Genome IDLAHU01143734
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 181
End posion on genome 105
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ctggccgtgt
tRNA gene sequence 
CGGGATGTGGCCCAGCTTGGTAGGGCACTGCGTTCGGGACGCAGGAGTCGCGCGTTCAAA
TCGCGCCATCCCGACCA
Downstream region at tRNA end position 
ttttttatct
Secondary structure (Cloverleaf model)
>WENV170671739	Pro	CGG
                   t      ACCA ttttttatct
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C G C G C     A
      C G A        G      | | | | |     A
    T       C C C G       G C G C G     C
    T       | | | |                 T T
    G       G G G C
      G T A        A     GAGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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