The detailed information of tRNA gene sequence


Sequence ID>WENV170671756
Genome IDLAHU01154321
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 410
End posion on genome 486
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tattatttta
tRNA gene sequence 
GGGCTCGTAGCTCAGTTGGTATGAGCGCGGCATTCGCAATGCCGAGGCCGCGGGTTCAAA
TCCCGCCGAGTCCACAA
Downstream region at tRNA end position 
atagataact
Secondary structure (Cloverleaf model)
>WENV170671756	Ala	CGC
                   a      ACAA atagataact
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G C C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A T        G     AGGCC
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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