The detailed information of tRNA gene sequence


Sequence ID>WENV170671794
Genome IDLAHU01171165
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 80
End posion on genome 167
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ggaataatca
tRNA gene sequence 
GCCGGAGTGGTGGAACTGGAAGACGCGTCGGACTCAAAATCCGATGGAGCTTGCCTCTGT
GCGGGTTCAAGCCCCGCCTCCGGCACCA
Downstream region at tRNA end position 
taaaatcaac
Secondary structure (Cloverleaf model)
>WENV170671794	Leu	CAA
                   a      ACCA taaaatcaac
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          C G
                    T     C G C C C     A
      C A A        G      | | | | |     A
    T       G G T G       G C G G G     C
    G         | + |                 T T
    G       A C G C
      A A G        G     TGGAGCTTGCCTCTGT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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