The detailed information of tRNA gene sequence


Sequence ID>WENV170671804
Genome IDLAHU01174953
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 376
End posion on genome 301
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
cttcatgtag
tRNA gene sequence 
CCCGGCGTGGCCTAGTCTGGTTAGGGCAGTGGACTGTAGATCCACGGATCGCTGGTTCAA
ATCCGGCCGCCGGGACtt
Downstream region at tRNA end position 
ttgggtcttt
Secondary structure (Cloverleaf model)
>WENV170671804	Tyr	GTA
                   g      ACtt ttgggtcttt
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G G C C     A
    C T G A        G      | | + | |     A
  T         T C C G       G C T G G     C
  G         + | | |                 T T
  G         G G G C
    T T A          A     GGATC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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