The detailed information of tRNA gene sequence


Sequence ID>WENV170671827
Genome IDLAHU01183208
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 50
End posion on genome 121
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agcgcctatt
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGCTACGCAAATGCCTGCAGAGCATTACCACTCCGGTTCGAATC
CGGACCTTGGCTttg
Downstream region at tRNA end position 
cctcattttg
Secondary structure (Cloverleaf model)
>WENV170671827	Cys	GCA
                   t      Tttg cctcattttg
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     A G G C C     A
        G A        G      | | | | |     G
      C     G G C G       T C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        A     ACCAC
                    A - T
                    A - T
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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