The detailed information of tRNA gene sequence


Sequence ID>WENV170671843
Genome IDLAHU01193729
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1088
End posion on genome 1161
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
tgattctaac
tRNA gene sequence 
AGCCGGGTAGGGTAGTGGTCAATCCTTCGAGGCTCTGGACCTTGAGACGGTGGTTCGAAT
CCGCCCCCGGCTACtg
Downstream region at tRNA end position 
ttttttcaat
Secondary structure (Cloverleaf model)
>WENV170671843	Gln	CTG
                   c      ACtg ttttttcaat
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C C G C C     A
      T G A        A      | | + | |     G
    G       T G G G       G G T G G     C
    G         | | +                 T T
    T       T C C T
      C A A        T     AGAC
                    C - G
                    G + T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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