The detailed information of tRNA gene sequence


Sequence ID>WENV170671858
Genome IDLAHU01199384
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 739
End posion on genome 662
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gatttcacat
tRNA gene sequence 
GGGACCGTGGGGTAGCTTGGACTAGCCTCTCACCTTGGGGTGGTGGAAACTCGGGTTCAA
ATCCCGACGGTCCCACCA
Downstream region at tRNA end position 
ttggaaatta
Secondary structure (Cloverleaf model)
>WENV170671858	Pro	GGG
                   t      ACCA ttggaaatta
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     A G C C C     A
    T C G A        G      | | | | |     A
  T         T G G G       T C G G G     C
  G         + | | +                 T T
  G         G C C T
    A C T A        C     AAAC
                    T + G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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